D3Pockets

Your result is visible to all users as you are currently a guest user. Please register if you want to protect your files.

Step 1. To set job title

 

Step 2. To select conformation files MD trajectory(AMBER)   MD trajectory(GROMACS)   Conformational ensemble   PDB

 

Step 3. To upload the file Upload files...   

Note:
1. MD trajectory(AMBER) : The uploaded file should be in a compressed format containing topology file saved as AMBER format "prmtop" and trajectory saved as AMBER trajectory format "mdcrd" with size of less than 50 MB. Sample File 1
2. MD trajectory(GROMACS) : The uploaded file should be in a compressed format containing topology file saved as format "pdb" and trajectory saved as GROMACS trajectory format "xtc" with size of less than 50 MB. Sample File 2
3. Conformational ensemble: the conformational ensemble should be generated bythe script. Sample File 3
4. PDB: The protein structure file(pdb file). Sample File 4
5. If you want to upload larger job, please contactus.

This site has been visited 3771454 times since Feb 2020.